I guess you know about the real-world sonic weapons that have been trialed. Most of these, like many light-based weapons, are used to temporarily disable without killing. They disorientate, or disable, the opposing force which then can be taken down non-lethally.
The most common form of actively used military sonic device is the flash-bang (or stun) grenade.
There are also (apocryphal) audio frequencies which are used to resonate with physiology. An early example of this was to use a subsonic frequency which caused the sphincter muscle to relax, and as this led to everyone defecating, it was very effective at stopping large frontal attacks. The difficulty was that it wasn't very directional, so the force using it had to wear nappies and be prepared to defecate themselves. Not very popular, and so further research was halted. Commentators (eg MythBusters) have pointed out that this factually appears to have been an urban myth - despite it being used in science fiction (eg, Michael Moorcock uses it in at least one text).
So, if you are happy with urban myth as a source of world-building, and if your work developed directional sonic devices, you could re-use this 'muscular resonant frequency' concept with great results!
To the detractors of 'bowel loosening sonics', it should be pointed out that there are many topics in this forum concerning entities which have been proven to be myths: Werewolves, Vampires, Mermaids, Ghosts are examples - but hey. let's trash modern urban myths, why not?