Basic numbers
A watt is one joule per second. There are 31.536 million seconds per year. Something generating one kilowatt of power yields about 3.15 x 10^10 joules if it runs for a whole year.
The fusion reaction the Sun uses is proton-proton fusion, which the Power of Sci-Fi says we'll be able to use as fuel in a reactor by the time we can colonize other planets anyway. This produces ~ 25 MeV per 4 hydrogen atoms. 25 MeV is 4.01 x 10^-12 joules.
To produce 3.15 x 10^10 joules, we need to run that reaction 7.86 x 10^21 times. That uses twice as many molecules of hydrogen gas (H2). Chemists find it easy to measure chemical weights using the mole. We have here about .0261 moles of hydrogen gas (H2) which is about .0522 grams.
Efficiency
No reaction is a hundred percent efficient. There ain't no such thing as a free lunch. I am assuming Futurium power, that is, much more advanced fusion technology that can achieve an implausible-by-today's-standards degree of efficiency. Futurium powered fusion can plausibly have just about any level of efficiency you want. Pessimistically, let's suppose 10% of the reactor's total energy (and thus, reaction mass) consumed is converted into usable output (light, in this case). This means we're using roughly ten times as much hydrogen gas as the theoretical limit, or about .522 grams to operate one of these for one year.
Ramifications
So, first of all: the total mass these reactors consume is miniscule. A one-kilowatt reactor burns .522 grams of hydrogen gas per year to provide the desired illumination. A reactor that generates more than 1 kilowatt of power will use proportionally more fuel, but still hardly anything.
One of these things running for a thousand years will use 520 grams of fuel. Ten thousand will use 5200 kilograms over that same timeframe. That might sound like a lot, but a person is about ten percent hydrogen by weight, which is somewhere around 6-7 kilograms.
In other words, the amount of hydrogen found in the organic material you're using to feed this population almost certainly dwarfs, by several orders of magnitude, the amount you would ever need for fuel. A small settlement is probably a military outpost or research base or something that regularly gets resupplied, and a large settlement is large enough this is a drop in the bucket.
This is why I used proton-proton fusion; other hydrogen fusion recipes, like the ones we're trying in our reactors in reality, require uncommon isotopes of hydrogen, which means they need a special fuel supply. Proton-proton fusion can use anything.