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@Johnny Obviously you can't rule out everything with an automated test, even if the data is then forwarded to humans for further inspection, but you can certainly compare with earth and look for anomalies, isolate them and either use samples on animals on board or send animals down on the surface to be monitored.As this is a colony ship it is expected to do as many tests as possible.For example they could test the alien fungal spores on human tissues. Anyways the best guinea pig would be clones: nobody cares for them so they are expendable.If they start dying once settled we need more tests...
Let's steal the fun from the robots... Let's start by polluting the orbit of the planet with some relay satellites and deploy a fleet of VR-controlled probes. Hoping that the ping isn't too high they could safely explore and rule out even more dangers.
The landing team would be aware of them (because they studied the video from the robot) and equipped properly because they can't assume the species behaviour: they are dealing with aliens, after all. They will eventually ascertain it when the team goes in the woods to capture some specimen and one of them tries to attack, gets incapacitated and held captive for further studies. However if the alien does only rely on smell to find enemies and be friendly as long as space suits are on, then the biologists will notice the aggressiveness of the caged specimens the moment they remove their suits.
I think that a video feed, some fences & guns resolves many problems. For the last point I believe they would analyze the air/soil/water samples with the robotic probe before even sending humans in there